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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940229.1_cds_XP_016484539.1_75543
CDS Infomation

[gene=LOC107805073] [db_xref=GeneID:107805073] [protein=probable beta-1,4-xylosyltransferase IRX9H isoform X2] [protein_id=XP_016484539.1] [location=complement(join(11038..11214,11418..11667,12064..12379,12839..12965))] [gbkey=CDS]
Sequence

ATGGCTTCTATTAGAAGAACATTGTCCCCAGTGCCTCGTCCTGGTAGTACTATGAATGGA
GAAGCATGTCTTGTTGCCTCTCCTTTGTCCAAGTCATCATCATGTACTCATAGCTATACA
CCAACTGAAACTCGGCCATTTCAAGCATACTATCTGAATCGTCTAGCCTATGGATTAAAG
TTGGTGCCTTCTCCTTTGCTGTGGATAGTTGTTGAGATGAATTCTCAGTCTGTTGAAACT
GCTGATATATTGAGAAGAACTGGAGTTATGTACAGGCATCTTGTGTGCAGCAAGAACATA
ACTGATGTGAAAGAAAAAAATGTGCACCTAAGGAATGTTGCACTCTCTCACATTGAAACA
CACCATCTAGATGGTATTGTCTATTTTGCTGATGAGTACAACATATACTCTGCTGATTTA
TTCGAGCAGATGAGACAGATCAGCCGGTTCGGGACATGGATTGTGGCAAGACTAGCTGAA
AATAATAGGAACGTTATCTTGCAGGGTCCAATCTGTAACGCCTCTCAGGTTATAGGTTGG
CACACTGAAGGTAGAGCAAAAAGATTTCAGAGATTCTATGCAGAAATATCGGGATTTGCG
TTCAATAGTACGATACTTTGGGATCCTAAGAGGTGGCACCGACCAACACTAGAACCTATA
AGGCAGTCTGATACAGCCATAGCTGGTTCCCAAGTGAGCACATTTATCGAACAAGTGGTA
GAAGATGAAAGCCAAATGGAATGCTTACCAATGCACTGTTCGAGAATCACGGTTTGGCAA
TTCAACACAGACACGTTGTACCCATATCCTCATGAGTGGCTTGTGAAGAATTACTCAAGC
ACCATTACTTCAATTGGATTACAATTTTGA

Peptide Sequence

PEP ID

XP_016484539.1
PEP Infomation

PREDICTED: probable beta-1,4-xylosyltransferase IRX9H isoform X2 [Nicotiana tabacum]
Sequence

MASIRRTLSPVPRPGSTMNGEACLVASPLSKSSSCTHSYTPTETRPFQAYYLNRLAYGLK
LVPSPLLWIVVEMNSQSVETADILRRTGVMYRHLVCSKNITDVKEKNVHLRNVALSHIET
HHLDGIVYFADEYNIYSADLFEQMRQISRFGTWIVARLAENNRNVILQGPICNASQVIGW
HTEGRAKRFQRFYAEISGFAFNSTILWDPKRWHRPTLEPIRQSDTAIAGSQVSTFIEQVV
EDESQMECLPMHCSRITVWQFNTDTLYPYPHEWLVKNYSSTITSIGLQF

Transcript Sequence

Gene sequence data has not been registered.